Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863872.1_cds_XP_016515817.1_28124
CDS Infomation

[gene=LOC107832478] [db_xref=GeneID:107832478] [protein=GBF-interacting protein 1-like isoform X5] [protein_id=XP_016515817.1] [location=join(190684..190744,191263..191377,191540..191964,192086..192262,193209..193599,194961..195240,195642..195803,198818..199327,201709..201996)] [gbkey=CDS]
Sequence

ATGCAGGGGAGGGGAAACAAGGGGAGTCGGGGAAACTTCACTTCTCGCCATGTTTCGCTT
GATGCTGGTGGTCGAAGGAACTCTGCACCTGATAAGGAAAATGGAGGCAGTCAAGTTTCT
GACAAGAGTGTCAAGCCATCTTCCGTACCAACTATTGAGACGAAGAATACTATAAGCTCA
TCAAGTTCCAGAGCCAATGGGCCTGGTGCTGTAGCTTTTGGGAGTAACAGTGTTGTACAT
GATGCCCATGCATCAGCAGGCAGAGGGATTAAGCAATCTGAAGCCACTGCAGGTGCTGGC
TCTGTCAAGTCGGAGGAACCACTGCACTCTCCAAGTCATGATGTGATCAAAAGCCCTAGA
GTGTCTGTAGGAACCAGGGATACACTTGGACAGAAGATGCCAAACTCCAGCAACTCTTCA
ACCTCCTTGTCTTCACCACCTTCGTCAGGAGCTTATTTTTCAGCATCAGATCCTGTTCTT
TTGCCATCTCATGATTCACGACTCCCTGGTGCAGTAGGCACAATTAGAAGGGAAGTTGGT
GGCCAGCGTGTGTCATCTGATCATGTCCCTACCAACTCGATCGGGAGCAAGGCAACCACT
GCAGTTTCTGACTCTAGAAGTTCGACTGTGCAAGTAAAAATGTCAAGCAAATTCCAGGGG
CCTGGAAAGAATCAGCTTCCAGATTCCTCACAATGTGCTTCATCGGCTCAGGGTGCTTCT
TCTCTTAGTAGGCCTTCATCTAATTACAACAACCGTCCACTGGTTGGCCCACAAAAAGCT
GGTCCTGGTAAGGAATGGAAGCCAAAGCCTACACACAATAATATTGCTCAGGGTAAAGCT
ACATCTGCTAGTTCATCTGATCTTTCTACAGTTTCTGCTGAAGTCGATACACAACCGCAG
CCTCCGTCTGTCAGTGTTGAATCAAAGGAAGGGACTTCGGAACTGCTGCAGAAGCTAGAA
AAATCACATATTTCAGAGATTCAGCATGTTATTATCCCTAACCACCTTCATGTGCCTGAG
GCTGAAAAACTTGGGTTCTGTTTTGGAAGTTTTGAAGCTAGCCTGGGTTTAGGTGTGAGC
CCTTACAATGCTGCTGAGAATGAAAAGACTCCATCACTTTCTGGAACTTCTGAGGATATT
GAAGAAACAGAAAATGAGCAATTTTCCAGTGATCAAAATCCACCAACCACCGCAGATTTT
TCTGACCAGTCTCCGCCTTCAAGTGGGCAGGAGAATTTATCTGCAAAGCCAGAAGATGTA
TCACCTTCTGTCCCTGAGTACAGTGAATCTAAGCAAGAGACTCTGCAAGGAGGCCATCAG
TATTCAGCTGTTCGTACATCCCCCAACTATAGTTTTGGTTTTGTGCCACCAACATTAGGC
AGTCAGCTTGCACCTTTTGAAAACTCTGAATTACAGTCTCATGATGTTTCTCGTCTTCCA
AACTTTGTTGTTCAGCAACCAATTGACCCAACAAACTACTATGCCCAGTTCTACCGCTCC
AGTGCTGATGGTGATGGCCGCATTTCACCTTTTCAATCAGCGGGAGTTTCTACCAAGTAC
AATGGCAATGTTTCAGTTGTGCCTCCACAAACTTCTCAACCTGCCCAAGAGAATGATTTG
CAGGGAGGAAACACTCTCGTTTTATCTTCAGCGGCTCCAACACCACTTGCAACTCAAGCT
CCTGGGCTTATGCAAAGTTCAGCAGCTGTAACTCAGCAACCTCTCCCTGTATTTCGACAA
GCTGCAGGGATGCATCTACCCCATTATCCTCCAAATTATATTCCATACGCTCACTACTTT
TCACCATATTATGTTCCACCAACAGCCATCCATCAATTCTTAAGCAATGGTGCATTTCCC
CAGCAACCTCAGGCTGGTGGCGTATATCCACCTCCACCATCCGCTGCTGCTGGCAGATAC
TCACTTTCACAATATAGGCCAGGAGCTAATATAGGAAACTCAACTCACAGTGGAGTGCCT
GGCTCGTATGGGCCATATGGATCCTCCACAGCCAACTATAACCCTAGTTCAACTACAGCA
GCTGGAAACCCTGCTTCTAATGATGATCTTTCTGCTGCTCAATTTAAGGAAAACAATGTC
CACGTGAATGGGCAACAACAGAGTGAGGGCTCAGGTGTGTGGATTACTCCAGGCCGAGAT
TTATCCAGCTTGCAAGCAAGTTCTTTTTATAACCTACCCCAGGGTCAAGTGGGTTTTACT
CCCGCACAACCTGGCCACGGAAACCTTGCTGGTCTTTATCATCCAGCACAACCGGTGACT
GCACAGACTGTTCATCCACTTATGCAACAGTCGCAGACGATGGCTGGTCCAGTTGATATG
GTAGGACCAACAGCCACTGTCTATCAGCAGCCTCAACATTCACAAATTAACTGGCCGAGT
AGCTACTAA

Peptide Sequence

PEP ID

XP_016515817.1
PEP Infomation

PREDICTED: GBF-interacting protein 1-like isoform X5 [Nicotiana tabacum]
Sequence

MQGRGNKGSRGNFTSRHVSLDAGGRRNSAPDKENGGSQVSDKSVKPSSVPTIETKNTISS
SSSRANGPGAVAFGSNSVVHDAHASAGRGIKQSEATAGAGSVKSEEPLHSPSHDVIKSPR
VSVGTRDTLGQKMPNSSNSSTSLSSPPSSGAYFSASDPVLLPSHDSRLPGAVGTIRREVG
GQRVSSDHVPTNSIGSKATTAVSDSRSSTVQVKMSSKFQGPGKNQLPDSSQCASSAQGAS
SLSRPSSNYNNRPLVGPQKAGPGKEWKPKPTHNNIAQGKATSASSSDLSTVSAEVDTQPQ
PPSVSVESKEGTSELLQKLEKSHISEIQHVIIPNHLHVPEAEKLGFCFGSFEASLGLGVS
PYNAAENEKTPSLSGTSEDIEETENEQFSSDQNPPTTADFSDQSPPSSGQENLSAKPEDV
SPSVPEYSESKQETLQGGHQYSAVRTSPNYSFGFVPPTLGSQLAPFENSELQSHDVSRLP
NFVVQQPIDPTNYYAQFYRSSADGDGRISPFQSAGVSTKYNGNVSVVPPQTSQPAQENDL
QGGNTLVLSSAAPTPLATQAPGLMQSSAAVTQQPLPVFRQAAGMHLPHYPPNYIPYAHYF
SPYYVPPTAIHQFLSNGAFPQQPQAGGVYPPPPSAAAGRYSLSQYRPGANIGNSTHSGVP
GSYGPYGSSTANYNPSSTTAAGNPASNDDLSAAQFKENNVHVNGQQQSEGSGVWITPGRD
LSSLQASSFYNLPQGQVGFTPAQPGHGNLAGLYHPAQPVTAQTVHPLMQQSQTMAGPVDM
VGPTATVYQQPQHSQINWPSSY

Transcript Sequence

Gene sequence data has not been registered.